Hi Jit Ren,
Below is an extract from the referred official blog post. Highlighted statement in bold specified that both Baltimore CyberTrust Root , GTE CyberTrust Global Root needs to be in the trusted root list. So, you should keep the GTE
CyberTrust Global Root.
Customer Impact
The Baltimore CyberTrust Root is widely trusted by a number of operating systems including Windows, Windows Phone, Android and iOS, and by browsers such as Internet Explorer, Safari, Chrome, Firefox, and Opera. We expect that the vast majority of customers
will not experience any issues due to this change. However, some customers may experience certificate validation failures if their custom applications do not include the Baltimore CyberTrust Root in their trusted root lists. Customers with such applications
must modify these applications to accept both the Baltimore CyberTrust Root and the GTE CyberTrust Global Root. We advise our customers to make this change no later than April 15<sup>th</sup>, 2013, as the majority of Windows Azure platform services
will begin the migration process on that date. Customers who do not have the Baltimore CyberTrust root in their trusted root lists and do not take the prescribed action will receive certificate validation errors, which may impact the availability of their
services.
Thanks,
Hari